Package: PamBinaries 1.9.0

Taiki Sakai

PamBinaries: Read and Process 'Pamguard' Binary Data

Functions for easily reading and processing binary data files created by 'Pamguard' (<https://www.pamguard.org/>). All functions for directly reading the binary data files are based on 'MATLAB' code written by Michael Oswald.

Authors:Taiki Sakai [aut, cre], Michael Oswald [aut], Douglas Gillespie [ctb]

PamBinaries_1.9.0.tar.gz
PamBinaries_1.9.0.zip(r-4.5)PamBinaries_1.9.0.zip(r-4.4)PamBinaries_1.9.0.zip(r-4.3)
PamBinaries_1.9.0.tgz(r-4.4-any)PamBinaries_1.9.0.tgz(r-4.3-any)
PamBinaries_1.9.0.tar.gz(r-4.5-noble)PamBinaries_1.9.0.tar.gz(r-4.4-noble)
PamBinaries_1.9.0.tgz(r-4.4-emscripten)PamBinaries_1.9.0.tgz(r-4.3-emscripten)
PamBinaries.pdf |PamBinaries.html✨
PamBinaries/json (API)

# Install 'PamBinaries' in R:
install.packages('PamBinaries', repos = c('https://taikisan21.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/taikisan21/pambinaries/issues

On CRAN:

5.14 score 9 stars 3 packages 17 scripts 716 downloads 8 exports 31 dependencies

Last updated 7 months agofrom:2f4471e13e. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 06 2024
R-4.5-winOKNov 06 2024
R-4.5-linuxOKNov 06 2024
R-4.4-winOKNov 06 2024
R-4.4-macOKNov 06 2024
R-4.3-winOKNov 06 2024
R-4.3-macOKNov 06 2024

Exports:combineBackgroundNoisecontourToFreqconvertPgDateloadBackgroundNoiseloadPamguardBinaryFilepbToDfplotBackgroundNoiseplotWMD

Dependencies:clicolorspacedplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbletidyselectutf8vctrsviridisLitewithr

Readme and manuals

Help Manual

Help pageTopics
Add Frequency and Time to Pamguard Whistle BinariescontourToFreq
Convert Pamguard Numeric Date to POSIXctconvertPgDate
Count Number of Active ChannelscountChannels
Convert Date Number to MillisecondsdateNumToMillis
Load and Format Background Noise DatacombineBackgroundNoise loadBackgroundNoise plotBackgroundNoise
Load Pamguard Binary FileloadPamguardBinaryFile
Convert Java Millisecond Time to RmillisToDateNum
Read Pamguard Binary DatapamBinRead
Convert a PamBinary Object to Data FramepbToDf
Plot Whistle ContourplotWMD
Read AIS DatareadAISData
Read Beam Former AnnotationreadBeamFormerAnnotation
Read Bearing AnnotationreadBearingAnnotation
Read Click Detector Background datareadClickBackground
Read Click Classifier AnnotationreadClickClsfrAnnotation
Read Click DatareadClickData
Read Click FooterreadClickFooter
Read Click Trigger LevelreadClickTriggerData
Read Click Trigger HeaderreadClickTriggerHeader
Read Clip DatareadClipData
Read DbHt DatareadDbHtData
Read Difar DatareadDifarData
Read Deep Learning AnnotationreadDLAnnotation
Read Deep Learning Detection DatareadDLDetData
Read Deep Learning Model DatareadDLModelData
Read File FooterreadFileFooterInfo
Read File HeaderreadFileHeader
Read GPL DetectionsreadGPLDetections
Read Java UTF-8 StringreadJavaUTFString
Read LTSA DatareadLTSAData
Read LTSA HeaderreadLTSAHeader
Read Matched Classifier AnnotationreadMatchClsfrAnnotation
Read Noise Band DatareadNoiseBandData
Read Noise Monitor DatareadNoiseMonData
Read Noise Monitor HeaderreadNoiseMonHeader
Read Pamguard DatareadPamData
Read Right Whale Edge Detector DatareadRWEDetectorData
Read Spectral Background datareadSpectralBackground
Read Standard Module FooterreadStdModuleFooter
Read Standard Module HeaderreadStdModuleHeader
Read TDBL AnnotationreadTDBLAnnotation
Read Target Motion AnnotationreadTMAnnotation
Read a Tritech TrackreadTritechTrack
Read Whistle and Moan DatareadWMDData
Read Whistle & Moan Detector HeaderreadWMDHeader